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ERP & Accounting
Integrate Webgility With Your Shipping and Fulfillment Software
Unlock a cleaner, faster way to run fulfillment and accounting together. Pair Webgility with ShipStation to capture orders and shipping expenses, keep multichannel operations organized, save with discounted rates, and give your team more control as volume grows.
Key integration features
- Sync orders into accounting
- Post shipping expenses automatically
- Reconcile multichannel sales data
- Track inventory across channels
- Compare carrier rates easily
About
Webgility is ecommerce accounting and inventory automation software for online sellers. It connects stores, marketplaces, and point-of-sale systems with accounting tools, and it's known for order-level reconciliation, inventory management, and financial workflow automation.
When you run Webgility with ShipStation, orders, fees, and shipping expenses stay tied together instead of living in separate tools. That means less manual bookkeeping, cleaner records, and a clearer view of what shipping is doing to each sale across your channels.
You also get stronger operational control as you grow. ShipStation supports 200+ store and marketplace integrations, connects to 200+ global carriers, and cuts clicks per order by 40% with automation. Your team spends less time fixing data and more time shipping, reconciling, and scaling with confidence.
Why Webgility users choose ShipStation
Move beyond basic shipping and fulfillment tools with ShipStation
STEP 1
Open Account Settings in ShipStation, choose Account, then API Settings. Select your API version and click Generate API Key to start the Webgility connection.
STEP 2
Check the verification link sent to the account owner’s user email, then generate the keys again. Only the account owner can create keys, and the plain-text key appears only once.
STEP 3
Set the key expiration for three, six, or 12 months, then generate and copy the API key and API secret right away. Store both securely before you leave the page.
STEP 4
Sign in to Unify, open the Connections tab, click Add Store, choose ShipStation, enter your API key and secret, and click Connect Store. Orders then start appearing in the Sales tab.
TESTIMONIAL
Find the best rate for every shipment
Compare rates, delivery speeds, and services side-by-side for every order that comes in from Shopify, and let ShipStation pick the best option—with up to 90% discounted rates across 200+ carriers.
ShipStation AI
Next-gen shipping intelligence
- SmartFill
- Automated Order Creation
- Universal AI Connect (MCP)
- Batch Label Processing
- Auto-PRO Retrieval
- Dynamic Spot-Pricing Engine
- Packing Recommendations
- 24/7 Always-On
Sign up for a free trial. No credit card required.
FAQ
Webgility and ShipStation FAQ
How does Webgility work with ShipStation?
Webgility pulls multichannel ecommerce orders, fees, and shipping expenses from your ShipStation account and posts that data into accounting. You can use it in two ways: one option focuses on order sync, and the other adds missing shipping expenses to orders already pulled from your store or marketplace. The result is cleaner books and less manual cleanup.
Which accounting systems work with Webgility for ShipStation?
Webgility for ShipStation posts data into QuickBooks Online, QuickBooks Desktop, and Xero. That gives sellers a direct path from shipping activity to bookkeeping without re-entering order and shipping data by hand.
Can Webgility sync shipping fees from ShipStation into accounting?
Yes. Webgility brings shipping expenses over from ShipStation. If you use the Sales Channels option, shipping expenses come over along with orders. If you use the Shipping Expenses option, Webgility pulls the missing shipping cost from ShipStation and associates it with orders already downloaded from your shopping cart or marketplace.
Does Webgility help with multichannel selling?
Yes. Webgility is built for sellers working across stores, platforms, locations, and marketplaces, and it brings that activity together in accounting. Pair that with ShipStation’s 200+ store and marketplace integrations, and you get a stronger view of sales, shipping, and fees across your operation instead of juggling disconnected systems.
Does Webgility support inventory management for businesses using ShipStation?
Yes. Webgility is known for inventory management and stock updates across channels, which helps keep your accounting side organized as sales move. ShipStation adds fulfillment-side control with inventory features, barcode scanning, and warehouse workflows that help your team ship accurately and avoid manual mistakes.
How do I connect Webgility to ShipStation?
The setup follows a short, direct path:
- Go to Account Settings in ShipStation
- Open Account, then API Settings
- Generate the API key as the account owner, verify the email link, and copy the key and secret right away
- Sign in to Unify, go to Connections, click Add Store, choose ShipStation, enter the API key and API secret, and click Connect Store
**Tip:** Copy and store the API key and API secret as soon as they appear. They won’t stay visible after you leave the page.
What happens after I connect ShipStation to Webgility Unify?
After you connect the store, orders start appearing in the Sales tab in Unify. By default, Webgility pulls in orders from the past 30 days. That gives your team a fast starting point, so you can begin reviewing sales and shipping expense data inside your accounting workflow.
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